import uuid # For UUID creation from initDb import initDb # For database initialization from wisski.api import Api, Pathbuilder, Entity # For WissKI API import os # For environment variable loading from dotenv import load_dotenv # For environment variable loading import pandas as pd # For dataframe handling # Initialize the database print('Initializing the database...') engine, metadata, Session = initDb(True, './schemas/') if engine == False: print('Database initialization failed.') exit() # Load the environment variables load_dotenv() # Initialize the WissKI API print('Initializing the WissKI API...') api_url = os.getenv('API_URL') auth = (os.getenv('API_USERNAME'), os.getenv('API_PASSWORD')) headers = {"Cache-Control": "no-cache"} api = Api(api_url, auth, headers) api.pathbuilder = api.get_pathbuilder('relations') tableName = "r__obj__67b0_bz_dok_nr" bundleId = 'b7fe64e0326c107a1a4a705be08392fa' # Artifact to inspection mark location relation try: processedRows = pd.read_csv(f'./logs/processed-{tableName}.csv') except FileNotFoundError: processedRows = pd.DataFrame(columns=['docId', 'uuid', 'uri']) # Load sources table sqlTable = pd.read_sql_table(tableName, con=engine) entityValues = {} # Create entities for index, row in sqlTable.iterrows(): # For every row in table... if index < len(processedRows) and sqlTable.loc[index, 'id'] == processedRows.loc[index, 'docId']: # skip if already processed print(f'Skipping already processed entity {sqlTable.loc[index, 'id']}') continue # Create Entity property dicts for key, value in row.items(): # For every column in row... if (value is None) or (value == ''): # skip if cell has no value continue # Properties of an entity have to be an array, so... if '&' in str(value): # ...Explode "&"-separated values to array items value = [x.strip() for x in str(value).split('&')] else: # ...Or parse to array value = [value] # Map columns to fields. We use assignments for reification. docId = '' match key: case 'id': docId = value[0] case 'f__obj__uuid': entityValues['f7ed714f705f51f4893427c7ba14dae8'] = value # Artifact UUID fUuid = value[0] case 'f__67b0_bz_dok_nr__uuid': entityValues['f7a330c34474ecf06737a334dd754e8b'] = value # Inspection Mark location assignment case _: print(f'{key} is not a valid field, skipping.') # Create Material entity = Entity(api=api, fields=entityValues, bundle_id=bundleId) api.save(entity) print(f'Created entity {index}: {entity.uri} of {len(sqlTable)}') # Write log processedRows = processedRows._append({'docId': docId, 'uuid': fUuid, 'uri': entity.uri}, ignore_index=True) processedRows.to_csv(f'./logs/processed-{tableName}.csv', index=False) print('finish')